STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000031775annotation not available (181 aa)    
Predicted Functional Partners:
ENSCHAP00000034698
annotation not available
    
 0.864
ENSCHAP00000032139
Matrix metallopeptidase 9.
   
 0.860
ENSCHAP00000004362
Matrix metallopeptidase 14b (membrane-inserted).
    
 0.844
ENSCHAP00000057104
annotation not available
    
 0.842
mmp2
Matrix metallopeptidase 2.
    
  0.832
ENSCHAP00000036810
Erb-b2 receptor tyrosine kinase 4a.
    
 0.828
erbb4
Erb-b2 receptor tyrosine kinase 4.
    
 0.828
egf
Epidermal growth factor.
     
 0.782
ENSCHAP00000037059
Erb-b2 receptor tyrosine kinase 3a.
    
 0.765
ENSCHAP00000057184
Erb-b2 receptor tyrosine kinase 3b.
    
 0.765
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.