STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000031999annotation not available (476 aa)    
Predicted Functional Partners:
ENSCHAP00000003887
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
    
 0.702
ENSCHAP00000007468
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b.
    
 0.702
ENSCHAP00000031632
ST3 beta-galactoside alpha-2,3-sialyltransferase 8.
  
  
0.644
ST3GAL1
ST3 beta-galactoside alpha-2,3-sialyltransferase 1.
     
0.606
st3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2.
     
0.605
ENSCHAP00000039866
annotation not available
    
 0.597
nelfa
Negative elongation factor complex member A.
    
 0.597
GALNT10
Polypeptide N-acetylgalactosaminyltransferase 10.
     
 0.572
ENSCHAP00000053438
Polypeptide N-acetylgalactosaminyltransferase like 6.
     
 0.572
galnt16
Polypeptide N-acetylgalactosaminyltransferase 16.
     
 0.550
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.