STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032010ATP-binding cassette, sub-family D (ALD), member 1. (783 aa)    
Predicted Functional Partners:
ENSCHAP00000028462
ATP-binding cassette, sub-family D (ALD), member 4.
  
0.900
pex19
Peroxisomal biogenesis factor 19.
    
 0.898
abcd3
ATP binding cassette subfamily D member 3.
  
0.865
LOC105910739
ATP-binding cassette sub-family D member 3-like.
  
0.865
LOC105891163
ATP-binding cassette sub-family D member 2-like.
  
  
 
0.849
ENSCHAP00000007471
Peroxisomal biogenesis factor 3.
   
 0.832
pex13
Peroxisomal biogenesis factor 13.
   
 
 0.804
ENSCHAP00000042236
Peroxisomal biogenesis factor 14.
   
 0.801
ENSCHAP00000011890
Family with sequence similarity 185 member A.
   
 0.778
ENSCHAP00000020475
acyl-CoA binding domain containing 5a.
    
 0.776
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.