STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032024Fucosyltransferase 11 (alpha (1,3) fucosyltransferase). (494 aa)    
Predicted Functional Partners:
st3gal4
ST3 beta-galactoside alpha-2,3-sialyltransferase 4.
     
 0.602
ENSCHAP00000007944
Fucosyltransferase 8b (alpha (1,6) fucosyltransferase).
     
 0.559
ENSCHAP00000014046
Fucosyltransferase 8a (alpha (1,6) fucosyltransferase).
     
 0.559
LOC105892436
Beta-hexosaminidase subunit alpha-like.
    
 0.536
ENSCHAP00000022769
Hexosaminidase B (beta polypeptide).
    
 0.536
st3gal3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3.
     
 0.528
B3GNT4
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4.
     
 0.505
ENSCHAP00000018781
Si:dkey-160o24.3.
     
 0.505
pofut2
Protein O-fucosyltransferase 2.
      
 0.446
ENSCHAP00000006133
Phosphatidylinositol glycan anchor biosynthesis class G.
      
 0.444
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.