STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032026NIPA magnesium transporter 2. (398 aa)    
Predicted Functional Partners:
uxs1
UDP-glucuronate decarboxylase 1.
   
 
 0.735
ENSCHAP00000039491
Tubulin, gamma complex associated protein 5.
   
  
 0.718
cyfip1
Cytoplasmic FMR1 interacting protein 1.
   
  
 0.693
ENSCHAP00000031792
Unc-50 homolog (C. elegans).
 
    
 0.583
alg5
ALG5 dolichyl-phosphate beta-glucosyltransferase.
   
 
  0.556
ENSCHAP00000025857
Membrane magnesium transporter 1.
      
 0.530
ENSCHAP00000022284
Bromodomain adjacent to zinc finger domain, 1B.
      
 0.524
ENSCHAP00000013465
ATPase phospholipid transporting 10A.
   
  
 0.430
ENSCHAP00000006457
Insulin-like growth factor binding protein 2a.
      
 0.424
ENSCHAP00000034294
SPT2 chromatin protein domain containing 1.
      
 0.420
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.