STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032029Platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit. (246 aa)    
Predicted Functional Partners:
pafah1b1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.985
ENSCHAP00000027818
Zgc:92162.
     
 0.871
LOC105894475
Platelet-activating factor acetylhydrolase-like.
     
 0.867
ENSCHAP00000005971
Lysophosphatidylcholine acyltransferase 2.
     
 0.867
ENSCHAP00000021843
annotation not available
     
 0.861
LOC105892033
Lysophosphatidylcholine acyltransferase 1-like.
     
 0.861
pla2g12a
Phospholipase A2 group XIIA.
     
 0.857
ENSCHAP00000027859
annotation not available
     
 0.855
pafah1b2
Platelet activating factor acetylhydrolase 1b catalytic subunit 2.
  
  
 
0.852
pla2g4a
Phospholipase A2 group IVA.
     
 0.851
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.