STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032052Galactosidase, beta 1. (663 aa)    
Predicted Functional Partners:
ENSCHAP00000049075
Galactosamine (N-acetyl)-6-sulfatase.
   
 0.922
ENSCHAP00000041636
Galactosidase, alpha.
  
 
 0.920
ENSCHAP00000017562
Glucosidase, beta, acid.
  
 0.915
ENSCHAP00000039664
Neuraminidase 1.
  
 0.909
galm
Galactose mutarotase.
  
 
 0.904
LOC105892436
Beta-hexosaminidase subunit alpha-like.
  
 
 0.890
ENSCHAP00000022769
Hexosaminidase B (beta polypeptide).
  
 
 0.890
ENSCHAP00000033911
Si:ch211-122f10.4.
   
 0.889
ctsa
Cathepsin A.
   
 0.889
LOC105910362
Lysosomal protective protein-like.
   
 0.889
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.