STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032099Danio rerio ring finger protein 213b (rnf213b), mRNA. (4135 aa)    
Predicted Functional Partners:
ENSCHAP00000009077
annotation not available
    
  0.697
ENSCHAP00000055818
annotation not available
   
    0.687
ENSCHAP00000055828
annotation not available
   
    0.687
ENSCHAP00000001221
annotation not available
    
  0.678
ENSCHAP00000042429
Adaptor related protein complex 2 subunit mu 1b.
    
  0.678
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.676
ndufa8
NADH:ubiquinone oxidoreductase subunit A8.
    
  0.666
ENSCHAP00000062356
Acid phosphatase 7, tartrate resistant (putative).
   
 0.635
ENSCHAP00000060131
Cyclin G associated kinase.
   
 0.625
ENSCHAP00000008049
enoyl-CoA delta isomerase 2.
    
  0.614
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.