STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032268annotation not available (189 aa)    
Predicted Functional Partners:
ENSCHAP00000052473
Fibronectin 1b.
     
 0.862
sdc4
Syndecan 4.
     
 0.861
ENSCHAP00000052398
annotation not available
     
 0.855
ENSCHAP00000060019
annotation not available
     
 0.855
ENSCHAP00000006625
annotation not available
     
 0.637
ENSCHAP00000007014
Glypican 2.
     
 0.637
ENSCHAP00000019939
Glypican 4.
     
 0.637
LOC105911916
Glypican-6-like.
     
 0.637
ENSCHAP00000059960
Glypican 6b.
     
 0.637
LOC105907071
Glypican-1-like.
     
 0.598
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.