STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032335Abelson helper integration site 1. (1205 aa)    
Predicted Functional Partners:
b9d1
B9 domain containing 1.
    
 0.951
ENSCHAP00000045491
Coiled-coil and C2 domain containing 2A.
    
 0.945
ENSCHAP00000038317
annotation not available
    
 0.940
b9d2
B9 domain containing 2.
    
 0.939
ENSCHAP00000041129
MKS transition zone complex subunit 1.
    
 0.939
ENSCHAP00000050629
Centrosomal protein 290.
   
 0.939
ENSCHAP00000002829
Transmembrane protein 67.
     
 0.931
ENSCHAP00000010014
Transmembrane protein 231.
     
 0.929
ENSCHAP00000040376
annotation not available
     
 0.929
ENSCHAP00000057929
Tectonic family member 2.
    
 0.898
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.