STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032350annotation not available (112 aa)    
Predicted Functional Partners:
vtn
Vitronectin.
    
 0.785
LOC105896257
Vitronectin-like.
    
 0.785
ENSCHAP00000003669
annotation not available
   
 
 0.578
HGFAC
HGF activator.
    
 0.532
ENSCHAP00000038619
annotation not available
    
 0.515
HABP2
Hyaluronan binding protein 2.
    
 0.515
ENSCHAP00000024169
Coagulation factor IIIa.
   
 
 0.433
ENSCHAP00000027875
annotation not available
   
 
 0.433
ENSCHAP00000014172
Plasminogen activator, tissue.
   
  0.403
LOC105892713
Serine protease 27-like.
   
  0.401
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.