STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032574annotation not available (984 aa)    
Predicted Functional Partners:
ENSCHAP00000000579
Kinesin light chain 3.
    
 
 0.671
ENSCHAP00000010024
Kinesin light chain 1a.
    
 
 0.641
ENSCHAP00000010988
annotation not available
    
 
 0.641
ENSCHAP00000033455
annotation not available
    
 
 0.641
ENSCHAP00000046375
annotation not available
    
 
 0.641
ENSCHAP00000012899
Nephronophthisis 3.
    
 
 0.577
aplp2
Amyloid beta precursor like protein 2.
   
 
 0.473
ENSCHAP00000033022
Amyloid beta (A4) precursor protein b.
   
 
 0.439
APP
Amyloid beta precursor protein.
   
 
 0.439
ENSCHAP00000011914
Amyloid beta (A4) precursor-like protein 1.
   
 
 0.405
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.