STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032609annotation not available (282 aa)    
Predicted Functional Partners:
LOC105906223
Gap junction beta-2 protein-like.
  
 
0.742
ENSCHAP00000004252
annotation not available
  
 
0.740
LOC105913257
Gap junction beta-2 protein-like.
  
 
0.738
LOC105895695
Gap junction beta-3 protein-like.
  
 
0.732
ENSCHAP00000022703
annotation not available
  
 
0.729
ENSCHAP00000029018
annotation not available
  
 
0.723
gjc2
Gap junction protein gamma 2.
    
0.717
ENSCHAP00000007085
annotation not available
  
 
0.701
LOC105895435
Gap junction alpha-6 protein-like.
  
  
 
0.697
ENSCHAP00000015329
Connexin 36.7.
  
  
 
0.693
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.