STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
guk1Guanylate kinase 1. (210 aa)    
Predicted Functional Partners:
ppil6
Peptidylprolyl isomerase like 6.
   
 0.922
aprt
Adenine phosphoribosyltransferase.
  
 
 0.919
gmps
Guanine monophosphate synthase.
  
 
 0.894
entpd3
Ectonucleoside triphosphate diphosphohydrolase 3.
    
  0.880
ENSCHAP00000042825
Ectonucleoside triphosphate diphosphohydrolase 1.
    
  0.880
entpd8
Ectonucleoside triphosphate diphosphohydrolase 8.
    
  0.879
ENSCHAP00000043627
HD domain containing 3.
  
 
 0.879
LOC105894955
Nucleoside diphosphate kinase, mitochondrial-like.
  
 0.872
nme3
NME/NM23 nucleoside diphosphate kinase 3.
  
 0.872
nme6
NME/NM23 nucleoside diphosphate kinase 6.
  
 0.871
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.