STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032747X-prolyl aminopeptidase 3, mitochondrial. (509 aa)    
Predicted Functional Partners:
sardh
Sarcosine dehydrogenase.
  
 0.747
ENSCHAP00000052030
Aminomethyltransferase.
  
 0.747
pdpr
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.747
ENSCHAP00000052209
Si:ch211-153b23.3.
    
  0.712
dao
D-amino acid oxidase.
  
 
 0.679
ENSCHAP00000021635
Zgc:172341.
  
 
 0.679
PIPOX
Pipecolic acid and sarcosine oxidase.
  
 
 0.679
ENSCHAP00000052223
Immunoresponsive gene 1, like.
  
 
 0.679
ENSCHAP00000057273
Pipecolic acid oxidase.
  
 
 0.679
ENSCHAP00000057491
Peptidase (mitochondrial processing) alpha.
   
 
 0.653
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.