STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105913283Sodium/glucose cotransporter 1-like. (660 aa)    
Predicted Functional Partners:
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
  
 
 0.632
prodh2
Proline dehydrogenase 2.
  
  
 0.607
ENSCHAP00000002580
Proline dehydrogenase (oxidase) 1b.
  
  
 0.607
ENSCHAP00000060373
Proline dehydrogenase (oxidase) 1a.
  
  
 0.607
aprt
Adenine phosphoribosyltransferase.
   
  
 0.552
ENSCHAP00000038078
Solute carrier family 5 member 8.
  
  
 0.513
nadk
NAD kinase.
    
  0.503
galk2
Galactokinase 2.
    
  0.494
galk1
Galactokinase 1.
    
  0.494
LOC105894116
Magnesium-dependent phosphatase 1-like.
   
    0.487
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.