STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000032855Si:ch211-66e2.5. (301 aa)    
Predicted Functional Partners:
ENSCHAP00000054227
Vascular cell adhesion molecule 1b.
    
  0.671
ENSCHAP00000009954
Integrin alpha 4.
    
  0.591
ENSCHAP00000000128
annotation not available
    
 0.590
ENSCHAP00000010542
Integrin, alpha E, tandem duplicate 2.
    
 0.590
ENSCHAP00000018998
annotation not available
    
 0.590
ENSCHAP00000019456
annotation not available
    
 0.590
ENSCHAP00000019535
annotation not available
    
 0.590
ENSCHAP00000034321
annotation not available
    
 0.590
ENSCHAP00000034577
annotation not available
    
 0.590
ENSCHAP00000035242
annotation not available
    
 0.590
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.