STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000033022Amyloid beta (A4) precursor protein b. (793 aa)    
Predicted Functional Partners:
ENSCHAP00000054324
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.965
NCSTN
Nicastrin.
    
 0.941
ENSCHAP00000047548
Nedd8 activating enzyme E1 subunit 1.
    
 0.934
ide
Insulin degrading enzyme.
    
 
 0.928
LOC105901460
Apolipoprotein Eb-like.
    
 0.920
ENSCHAP00000008212
annotation not available
    
 
 0.915
LOC105900126
Contactin-4-like.
   
 
 0.861
ENSCHAP00000062453
Contactin 4.
   
 
 0.861
psen2
Presenilin 2.
    
 
 0.856
psen1
Presenilin 1.
    
 
 0.856
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.