STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000033028Transcription factor binding to IGHM enhancer 3a. (523 aa)    
Predicted Functional Partners:
ENSCHAP00000050133
annotation not available
  
 
0.901
ENSCHAP00000054858
Transcription factor binding to IGHM enhancer 3b.
  
  
 
0.850
mitf
Melanocyte inducing transcription factor.
  
  
0.781
ENSCHAP00000036066
Mechanistic target of rapamycin kinase.
    
 
 0.678
ENSCHAP00000020871
annotation not available
    
 0.652
LOC105896734
14-3-3 protein zeta-like.
    
 0.652
LOC105901861
14-3-3 protein beta/alpha-1.
    
 0.652
ENSCHAP00000026943
Mitogen-activated protein kinase 3.
    
 0.635
mapk1
Mitogen-activated protein kinase 1.
    
 0.635
sumo1
Small ubiquitin like modifier 1.
    
  0.634
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.