STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000033089Nucleolar and spindle associated protein 1. (469 aa)    
Predicted Functional Partners:
ENSCHAP00000020403
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.961
ube2c
Ubiquitin conjugating enzyme E2 C.
   
  
 0.949
ENSCHAP00000002342
PDZ binding kinase.
   
  
 0.942
tpx2
TPX2 microtubule nucleation factor.
   
 
 0.942
cenpf
Centromere protein F.
   
  
 0.939
ENSCHAP00000046868
NDC80 kinetochore complex component.
   
  
 0.938
ENSCHAP00000009576
Cell division cycle associated 8.
   
  
 0.936
ENSCHAP00000038482
Ttk protein kinase.
   
  
 0.932
aspm
Abnormal spindle microtubule assembly.
   
  
 0.928
nuf2
NUF2 component of NDC80 kinetochore complex.
   
  
 0.923
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.