STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000033134annotation not available (331 aa)    
Predicted Functional Partners:
ENSCHAP00000061282
annotation not available
    
 0.864
ENSCHAP00000003985
annotation not available
    
  0.823
ENSCHAP00000005035
Replication protein A2.
   
 0.796
ENSCHAP00000035772
annotation not available
   
 0.796
ENSCHAP00000054866
TAP binding protein (tapasin), tandem duplicate 2.
 
 
 0.757
ENSCHAP00000035341
Calreticulin.
    
  0.731
ENSCHAP00000004633
Calreticulin 3b.
    
  0.726
LOC105896182
Protein disulfide-isomerase A3-like.
    
  0.723
pdia3
Protein disulfide isomerase family A member 3.
    
  0.723
stn1
STN1 subunit of CST complex.
   
 0.722
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.