STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000033192Splicing factor proline/glutamine-rich. (595 aa)    
Predicted Functional Partners:
ENSCHAP00000043344
annotation not available
   
 
 0.714
ENSCHAP00000044576
PTK6 protein tyrosine kinase 6b.
    
  0.591
ENSCHAP00000032998
RNA binding motif protein 14b.
   
 
0.576
ENSCHAP00000027767
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
 0.564
LOC105907732
Proto-oncogene tyrosine-protein kinase Yrk-like.
    
  0.563
ENSCHAP00000038318
FYN proto-oncogene, Src family tyrosine kinase b.
    
  0.563
ENSCHAP00000040809
PTK6 protein tyrosine kinase 6a.
    
  0.563
srms
Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites.
    
  0.563
ENSCHAP00000051376
FYN proto-oncogene, Src family tyrosine kinase a.
    
  0.563
ENSCHAP00000021060
annotation not available
   
 
 0.542
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.