STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000033332Nardilysin b (N-arginine dibasic convertase). (1119 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.906
ENSCHAP00000030857
annotation not available
    
  0.880
ENSCHAP00000051064
Preproinsulin b.
    
 0.873
ENSCHAP00000057401
Preproinsulin.
    
 0.873
ENSCHAP00000030291
Ubiquitin B.
    
  0.869
LOC105898511
Insulin-like.
    
 0.859
iapp
Islet amyloid polypeptide.
    
 
 0.812
anapc5
Anaphase promoting complex subunit 5.
   
 
 0.788
ENSCHAP00000042014
Anaphase promoting complex subunit 1.
   
 
  0.787
ENSCHAP00000037993
annotation not available
    
   0.751
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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