STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000033610Synaptotagmin-like 2b. (2024 aa)    
Predicted Functional Partners:
ENSCHAP00000033594
RAB27B, member RAS oncogene family.
    
 
 0.779
ENSCHAP00000016490
Intersectin 2b.
     
 0.708
ENSCHAP00000057857
Intersectin 2a.
     
 0.708
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.660
RIMS2-2
Regulating synaptic membrane exocytosis 2.
     
0.660
ENSCHAP00000030058
annotation not available
   
 0.629
LOC105900867
Ras-related protein Rab-3A.
   
 0.629
STON2
Stonin 2.
   
 0.622
ENSCHAP00000022430
RAB3B, member RAS oncogene family.
   
 0.562
rab3c
RAB3C, member RAS oncogene family.
   
 0.562
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.