STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000033621Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B. (827 aa)    
Predicted Functional Partners:
LOC105902244
DDB1- and CUL4-associated factor 7.
   
 
 0.960
LOC105898766
DDB1- and CUL4-associated factor 7-like.
   
 
 0.960
ENSCHAP00000040372
Lin-52 DREAM MuvB core complex component.
    
 0.849
lin54
Lin-54 DREAM MuvB core complex component.
   
 0.766
ENSCHAP00000041991
Lin-37 DREAM MuvB core complex component.
    
 0.735
ENSCHAP00000024681
E1A binding protein p300 a.
   
 0.719
ENSCHAP00000031900
E1A binding protein p300 b.
   
 0.719
ENSCHAP00000025501
CREB binding protein a.
   
 0.715
ENSCHAP00000011383
annotation not available
    
 0.714
LOC105893332
Histone-binding protein RBBP7.
    
 0.714
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.