STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000033660annotation not available (162 aa)    
Predicted Functional Partners:
ENSCHAP00000041540
ALK receptor tyrosine kinase.
    
 
 0.686
ENSCHAP00000037470
Leukocyte receptor tyrosine kinase.
    
 
 0.651
ENSCHAP00000052531
C-ros oncogene 1 , receptor tyrosine kinase.
    
 
 0.651
ENSCHAP00000016391
Macrophage stimulating 1 receptor b.
    
 
 0.554
ENSCHAP00000041906
Macrophage stimulating 1 receptor a.
    
 
 0.554
ENSCHAP00000053649
MET proto-oncogene, receptor tyrosine kinase.
    
 
 0.554
ENSCHAP00000003145
Chondroitin polymerizing factor b.
   
    0.550
ENSCHAP00000056233
Chondroitin polymerizing factor a.
   
    0.550
chpf2
Chondroitin polymerizing factor 2.
   
    0.550
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.