STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znrf2Zinc and ring finger 2. (229 aa)    
Predicted Functional Partners:
UBE2N
Ubiquitin conjugating enzyme E2 N.
    
 
 0.867
ube2n
Ubiquitin conjugating enzyme E2 N.
    
 
 0.867
ENSCHAP00000030291
Ubiquitin B.
   
  0.543
ENSCHAP00000013366
Ubiquitin-like modifier activating enzyme 5.
     
 0.477
ENSCHAP00000037357
ATG7 autophagy related 7 homolog (S. cerevisiae).
     
 0.477
klhl22
Kelch like family member 22.
      
 0.420
klhl21
Kelch like family member 21.
      
 0.416
ENSCHAP00000047446
annotation not available
      
 0.408
ENSCHAP00000008770
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.407
ENSCHAP00000014774
Neuralized E3 ubiquitin protein ligase 1Aa.
      
 0.407
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.