STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000033762Regulatory factor X, 6. (772 aa)    
Predicted Functional Partners:
chek2
Checkpoint kinase 2.
   
 0.872
ENSCHAP00000059383
Regulatory factor X-associated protein.
    
 0.848
ENSCHAP00000038241
ATR serine/threonine kinase.
    
 
 0.810
rfxank
Regulatory factor X associated ankyrin containing protein.
    
 0.769
ankra2
Ankyrin repeat family A member 2.
    
 0.717
ENSCHAP00000057401
Preproinsulin.
     
 0.674
ENSCHAP00000036037
Tonsoku-like, DNA repair protein.
    
  0.605
ENSCHAP00000018869
Doublecortin-like kinase 1b.
     
 0.593
ENSCHAP00000038003
Doublecortin-like kinase 1a.
     
 0.593
ENSCHAP00000029274
Regulatory factor X7a.
    
 
 0.532
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.