STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tubgcp3Tubulin gamma complex associated protein 3. (902 aa)    
Predicted Functional Partners:
ENSCHAP00000035349
Tubulin, gamma 1.
   
 0.999
ENSCHAP00000050441
Tubulin, gamma complex associated protein 2.
   
0.999
mzt1
Mitotic spindle organizing protein 1.
    
 0.999
tubgcp4
Tubulin gamma complex associated protein 4.
   
0.998
ENSCHAP00000039491
Tubulin, gamma complex associated protein 5.
    
0.998
ENSCHAP00000045238
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
0.998
ENSCHAP00000031607
acyl-CoA dehydrogenase family, member 8.
   
 0.966
acadm
acyl-CoA dehydrogenase medium chain.
   
 0.966
tubd1
Tubulin delta 1.
   
 0.961
LOC105899316
Tubulin delta chain-like.
   
 0.961
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.