STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000033888poly(A) specific ribonuclease subunit PAN3. (532 aa)    
Predicted Functional Partners:
pan2
poly(A) specific ribonuclease subunit PAN2.
  
 
 0.999
pabpc1
poly(A) binding protein cytoplasmic 1.
    
 0.966
PABPC3
poly(A) binding protein cytoplasmic 3.
    
 0.966
ENSCHAP00000046918
poly(A) binding protein, cytoplasmic 4 (inducible form).
    
 0.966
ISG20L2
Interferon stimulated exonuclease gene 20 like 2.
    
 0.959
ENSCHAP00000023410
annotation not available
    
 0.959
ENSCHAP00000028109
Zgc:152968.
    
 0.959
LOC105888498
Apoptosis-enhancing nuclease-like.
    
 0.959
ENSCHAP00000061304
REX4 homolog, 3'-5' exonuclease.
    
 0.959
LOC105911096
Polyadenylate-binding protein 5-like.
    
 0.926
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.