STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000034316Metaxin 1b. (381 aa)    
Predicted Functional Partners:
ENSCHAP00000040491
Sorting and assembly machinery component 50 homolog, like.
   
 0.959
ENSCHAP00000050557
SAMM50 sorting and assembly machinery component.
   
 0.959
ENSCHAP00000015815
Metaxin 2.
    
0.947
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.927
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
   
 0.922
ENSCHAP00000011016
Translocase of outer mitochondrial membrane 40 homolog (yeast).
   
 0.922
LOC105902030
Mitochondrial import receptor subunit TOM40 homolog.
   
 0.922
tomm20
Translocase of outer mitochondrial membrane 20.
    
 0.918
ENSCHAP00000060459
Translocase of outer mitochondrial membrane 22 homolog (yeast).
    
 0.908
ENSCHAP00000021669
Si:ch73-22o12.1.
   
 0.897
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.