STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebi3Epstein-Barr virus induced 3. (322 aa)    
Predicted Functional Partners:
ENSCHAP00000038399
Colony stimulating factor 3 receptor (granulocyte).
   
 0.918
ENSCHAP00000027755
Calmegin.
    
  0.809
ENSCHAP00000056015
Interleukin 12 receptor, beta 2a.
    
 0.798
ENSCHAP00000001459
Cardiotrophin-like cytokine factor 1.
    
 0.778
ENSCHAP00000015931
annotation not available
   
 0.774
ENSCHAP00000016489
annotation not available
   
 0.774
ENSCHAP00000044251
annotation not available
   
 0.774
ENSCHAP00000032072
Interleukin 6 signal transducer.
    
 0.760
ENSCHAP00000056004
annotation not available
    
 0.760
ENSCHAP00000020105
Si:ch211-274f20.2.
    
  0.713
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.