STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000034473Syntaxin binding protein 1b. (627 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.987
RIMS2-2
Regulating synaptic membrane exocytosis 2.
     
 0.987
ENSCHAP00000008118
Vesicle-associated membrane protein 2.
   
 0.877
ENSCHAP00000008243
annotation not available
   
 0.877
ENSCHAP00000048391
annotation not available
   
 0.877
snap25
Synaptosome associated protein 25.
   
 0.877
LOC105913027
syntaxin-1B.
   
 0.866
STX3
Syntaxin 3.
   
 0.858
ENSCHAP00000006011
annotation not available
   
 0.858
ENSCHAP00000010745
annotation not available
   
 0.845
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.