STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000034474Ubiquitin carboxyl-terminal hydrolase L5. (356 aa)    
Predicted Functional Partners:
ENSCHAP00000001736
Nuclear factor related to kappaB binding protein.
    
 0.995
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 0.993
ENSCHAP00000035188
Proteasome 26S subunit, ATPase 4.
   
 0.993
psmd8
Proteasome 26S subunit, non-ATPase 8.
   
 0.993
ENSCHAP00000006174
Proteasome 26S subunit, non-ATPase 12.
   
 0.992
psmc6
Proteasome 26S subunit, ATPase 6.
   
 0.992
ENSCHAP00000019222
Proteasome 26S subunit, ATPase 5.
   
 0.992
PSMD2
Proteasome 26S subunit, non-ATPase 2.
   
 0.991
ENSCHAP00000062146
BRCA1 associated RING domain 1.
    
 0.991
ENSCHAP00000016544
Proteasome 26S subunit, non-ATPase 3.
   
 0.990
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.