STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000034562SAM and SH3 domain containing 1a. (1141 aa)    
Predicted Functional Partners:
pik3r2
Phosphoinositide-3-kinase regulatory subunit 2.
    
  0.600
ENSCHAP00000042865
Phosphoinositide-3-kinase, regulatory subunit 3b (gamma).
    
  0.600
LOC105896427
Phosphatidylinositol 3-kinase regulatory subunit gamma-like.
    
  0.600
ENSCHAP00000057288
Phosphoinositide-3-kinase, regulatory subunit 1 (alpha).
    
  0.600
shc2
SHC adaptor protein 2.
    
 0.588
ENSCHAP00000039200
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.588
SHC3
SHC adaptor protein 3.
    
 0.588
SHC4
SHC adaptor protein 4.
    
 0.588
trmt11
tRNA methyltransferase 11 homolog.
      
 0.530
ENSCHAP00000048183
THO complex 5.
     
 0.527
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.