STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000034626Actin related protein 2/3 complex, subunit 5B. (150 aa)    
Predicted Functional Partners:
ENSCHAP00000040099
Actin related protein 2/3 complex, subunit 4.
   
 0.999
arpc2
Actin related protein 2/3 complex subunit 2.
   
 0.998
LOC105901564
Actin-related protein 2-B.
   
 0.995
LOC105900701
Actin-related protein 3.
   
 0.991
actr3b
Actin related protein 3B.
   
 0.991
ENSCHAP00000012439
Zgc:101810.
   
 0.984
ENSCHAP00000016490
Intersectin 2b.
   
 
  0.981
ENSCHAP00000057857
Intersectin 2a.
   
 
  0.981
ENSCHAP00000001821
G protein-coupled bile acid receptor 1.
   
 0.971
LOC105892277
G-protein coupled bile acid receptor 1-like.
   
 0.971
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.