STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000034716annotation not available (508 aa)    
Predicted Functional Partners:
mdh2
Malate dehydrogenase 2.
   
  0.867
mdh1
Malate dehydrogenase 1.
   
  0.858
LOC105909395
Malate dehydrogenase, cytoplasmic-like.
   
  0.857
idh3a
Isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha.
    
 0.850
th
Tyrosine hydroxylase.
     
 0.846
ENSCHAP00000017185
Tyrosine hydroxylase 2.
     
 0.845
LOC105911600
S-adenosylmethionine synthase isoform type-1-like.
   
 0.842
ENSCHAP00000020549
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
    
  0.841
idh2
Isocitrate dehydrogenase (NADP(+)) 2.
    
  0.840
ENSCHAP00000011452
Isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta.
    
 0.840
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.