STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000034799UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3. (397 aa)    
Predicted Functional Partners:
pomgnt1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
   
 0.875
ENSCHAP00000007944
Fucosyltransferase 8b (alpha (1,6) fucosyltransferase).
     
 0.873
ENSCHAP00000014046
Fucosyltransferase 8a (alpha (1,6) fucosyltransferase).
     
 0.873
st3gal3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3.
     
 0.869
b3gnt3
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3.
   
 
 0.868
ENSCHAP00000011393
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1.
     
 0.868
b3gnt5
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5.
   
 
 0.868
ENSCHAP00000030721
annotation not available
     
 0.868
b3gat2
Beta-1,3-glucuronyltransferase 2.
 
 
 
 0.860
B3GALT1
Beta-1,3-galactosyltransferase 1.
   
 
 0.858
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.