STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000034867TEN1 subunit of CST complex. (152 aa)    
Predicted Functional Partners:
stn1
STN1 subunit of CST complex.
    
 0.998
ctc1
CST telomere replication complex component 1.
    
 0.998
ENSCHAP00000010710
Polymerase (DNA directed), alpha 1.
    
  0.966
ENSCHAP00000013600
DNA primase subunit 2.
    
  0.966
prim1
DNA primase subunit 1.
    
  0.966
pola2
DNA polymerase alpha 2, accessory subunit.
    
  0.943
ENSCHAP00000050843
annotation not available
    
  0.943
ENSCHAP00000044281
Protection of telomeres 1 homolog.
    
 0.937
ENSCHAP00000005035
Replication protein A2.
    
 0.930
ENSCHAP00000035772
annotation not available
    
 0.930
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.