STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000035046annotation not available (481 aa)    
Predicted Functional Partners:
mtrex
Mtr4 exosome RNA helicase.
   
 0.811
tent4a
Terminal nucleotidyltransferase 4A.
   
 0.698
ENSCHAP00000028382
Terminal nucleotidyltransferase 4B.
   
 0.698
ENSCHAP00000026783
SKI2 homolog, superkiller viralicidic activity 2-like.
   
 0.539
ENSCHAP00000021984
Importin 7.
   
 0.499
ENSCHAP00000046329
Importin 8.
   
 0.499
gcn1
GCN1 activator of EIF2AK4.
    
  0.462
ENSCHAP00000051880
EBNA1 binding protein 2.
   
   0.447
ENSCHAP00000057247
Danio rerio pumilio RNA-binding family member 3 (pum3), mRNA.
   
   0.428
rpl11
Ribosomal protein L11.
   
   0.426
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.