STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000035434Troponin T type 3a (skeletal, fast). (193 aa)    
Predicted Functional Partners:
ENSCHAP00000005591
Troponin I type 1b (skeletal, slow).
 
 0.976
LOC105906494
Troponin I, fast skeletal muscle-like.
 
 
 0.956
ENSCHAP00000037851
Troponin I, skeletal, slow d.
 
 0.952
ENSCHAP00000033908
Troponin I type 2a (skeletal, fast), tandem duplicate 2.
 
 0.937
myl1
Myosin light chain 1.
   
 0.928
ENSCHAP00000002538
Troponin I4b, tandem duplicate 2.
  
 0.919
ENSCHAP00000040615
Troponin C type 2 (fast).
   
 0.915
LOC105890625
Troponin C, skeletal muscle.
   
 0.915
ENSCHAP00000002252
annotation not available
 
 
 0.903
LOC105888483
Troponin I, slow skeletal muscle-like.
   
 0.903
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.