STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000035744annotation not available (1120 aa)    
Predicted Functional Partners:
ENSCHAP00000026217
Myosin IIIA.
   
 
 0.661
ENSCHAP00000026726
annotation not available
   
 
 0.661
ENSCHAP00000032432
annotation not available
   
 
 0.661
ENSCHAP00000054831
Myosin IIIB.
   
 
 0.661
LOC105911532
Orexin receptor type 2-like.
    
 0.639
ENSCHAP00000039433
Inositol polyphosphate phosphatase-like 1b.
     
 0.618
ENSCHAP00000001608
Ligand of numb-protein X 1.
   
 0.615
ENSCHAP00000018444
annotation not available
   
 0.615
ENSCHAP00000019334
PATJ crumbs cell polarity complex component.
   
 0.615
ENSCHAP00000028345
annotation not available
   
 0.615
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.