STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000035821annotation not available (143 aa)    
Predicted Functional Partners:
swi5
SWI5 homologous recombination repair protein.
   
 0.984
ENSCHAP00000027211
X-ray repair complementing defective repair in Chinese hamster cells 3.
    
 0.908
ENSCHAP00000039226
Autophagy related 9B.
    
   0.859
ENSCHAP00000052550
ATG9 autophagy related 9 homolog A (S. cerevisiae).
    
   0.859
ENSCHAP00000020926
RAD51 paralog D.
    
 0.725
rad51
RAD51 recombinase.
    
 0.725
ENSCHAP00000036359
RAD51 paralog B.
    
 0.725
ENSCHAP00000003831
RAD51 paralog C.
    
 0.690
ENSCHAP00000023187
annotation not available
    
 0.690
ENSCHAP00000060454
DNA meiotic recombinase 1.
    
 0.690
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.