STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000035961Peter pan homolog. (564 aa)    
Predicted Functional Partners:
wdr74
WD repeat domain 74.
   
 0.999
ENSCHAP00000006597
Pescadillo.
   
 0.999
ENSCHAP00000008125
GTP binding protein 4.
   
  0.999
rrp15
Ribosomal RNA processing 15 homolog.
   
 0.999
ENSCHAP00000036462
annotation not available
   
 0.999
ENSCHAP00000051880
EBNA1 binding protein 2.
   
 0.999
ENSCHAP00000056243
annotation not available
   
  0.999
noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
 0.999
rsl24d1
Ribosomal L24 domain containing 1.
   
 0.998
ENSCHAP00000025631
BOP1 ribosomal biogenesis factor.
   
 0.998
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.