STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000036126Carboxypeptidase O. (382 aa)    
Predicted Functional Partners:
ENSCHAP00000039421
Complement component 5.
   
 0.645
agt
Angiotensinogen.
   
 
  0.538
cpn1
Carboxypeptidase N subunit 1.
  
 
 0.538
ENSCHAP00000022908
Latexin.
    
 
 0.481
cpe
Carboxypeptidase E.
  
  
 0.461
ENSCHAP00000011386
Serpin peptidase inhibitor, clade D (heparin cofactor), member 1.
   
 
 0.425
ENSCHAP00000046846
annotation not available
   
  0.423
cpm
Carboxypeptidase M.
  
  
 0.420
haus4
HAUS augmin like complex subunit 4.
    
  0.412
LOC105899747
Chymotrypsin B-like.
   
 
 0.411
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.