STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000036245Angiopoietin-like 7. (343 aa)    
Predicted Functional Partners:
ENSCHAP00000041191
TEK tyrosine kinase, endothelial.
   
 0.847
ENSCHAP00000053428
annotation not available
   
 0.847
ENSCHAP00000059092
annotation not available
    
  0.683
LOC105911745
Platelet-derived growth factor receptor-like protein.
    
 0.645
LOC105903007
Platelet-derived growth factor receptor-like protein.
    
 0.645
PDGFRB
Platelet derived growth factor receptor beta.
    
 0.630
ENSCHAP00000046980
annotation not available
    
 0.630
ENSCHAP00000047049
Platelet-derived growth factor receptor, beta polypeptide.
    
 0.630
ENSCHAP00000006669
Fms-related tyrosine kinase 4.
    
 0.611
ENSCHAP00000010756
Platelet-derived growth factor receptor, alpha polypeptide.
    
 0.611
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.