STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thoc1THO complex 1. (660 aa)    
Predicted Functional Partners:
thoc3
THO complex 3.
    
 0.999
ENSCHAP00000043503
THO complex 2.
   
 0.999
ENSCHAP00000048183
THO complex 5.
   
 0.999
thoc7
THO complex 7.
    
 0.999
LOC105904970
THO complex subunit 4-like.
    
 0.992
ENSCHAP00000032057
Zinc finger CCCH-type containing 13.
   
 0.991
sarnp
SAP domain containing ribonucleoprotein.
    
 0.987
ENSCHAP00000024153
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa.
   
 0.977
ENSCHAP00000036871
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B.
   
 0.977
LOC105901571
ATP-dependent RNA helicase DDX39A.
   
 0.977
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.