STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zbtb44Zinc finger and BTB domain containing 44. (663 aa)    
Predicted Functional Partners:
LOC105901658
Extracellular matrix protein 1-like.
    
 
 0.599
bsx
Brain specific homeobox.
    
 0.494
runx2
RUNX family transcription factor 2.
   
 0.491
ENSCHAP00000021090
RUNX family transcription factor 2b.
   
 0.491
LOC105896069
Runt-related transcription factor 3-like.
   
 0.491
ENSCHAP00000010253
Transcription factor 7 like 2.
    
 0.464
tcf7l1
Transcription factor 7 like 1.
    
 0.464
ENSCHAP00000044121
SERTA domain containing 4.
    
 
 0.464
tcf7
Transcription factor 7.
    
 0.464
LOC105912913
Transcription factor 7-like 1-A.
    
 0.464
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.