STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000036334Influenza virus NS1A binding protein a. (642 aa)    
Predicted Functional Partners:
CUL1
Cullin 1.
    
 0.687
ENSCHAP00000027667
Cullin 3a.
    
 0.687
LOC105907046
Cullin-1.
    
 0.687
bbs9
Bardet-Biedl syndrome 9.
    
 0.686
rbx1
Ring-box 1.
    
 0.681
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.680
ENSCHAP00000022879
UBX domain protein 7.
    
  0.664
ENSCHAP00000047744
annotation not available
  
 
 
0.659
ENSCHAP00000033421
Tetratricopeptide repeat domain 8.
    
 0.658
PRPSAP1
Phosphoribosyl pyrophosphate synthase-associated protein 1.
    
 
 0.636
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.