STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab32RAB32, member RAS oncogene family. (213 aa)    
Predicted Functional Partners:
ENSCHAP00000016623
Rab geranylgeranyltransferase subunit alpha.
    
 0.819
CHML
Rab proteins geranylgeranyltransferase component A 2-like.
    
 0.780
ENSCHAP00000013924
Ankyrin repeat domain 27 (VPS9 domain).
    
 
 0.775
ENSCHAP00000060131
Cyclin G associated kinase.
    
 
 0.769
ENSCHAP00000053791
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.736
ENSCHAP00000012269
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
     
 0.710
ENSCHAP00000012175
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 
 0.675
hps4
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.
     
 0.648
ENSCHAP00000023906
GDP dissociation inhibitor 1.
    
 0.618
gdi1
GDP dissociation inhibitor 1.
    
 0.618
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.